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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904155.1_cds_XP_016454301.1_48342
CDS Infomation

[gene=LOC107778534] [db_xref=GeneID:107778534] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH11-like isoform X3] [protein_id=XP_016454301.1] [location=complement(join(17160..17201,17254..17388,17485..17565,17643..17751,17854..17903,18017..18118,18420..18497,19843..20109,20339..20438,20559..20926))] [gbkey=CDS]
Sequence

ATGCAAACATCAAAAGAAACATTTAAGGAAATATTAATTTCCGCTGGTATTAGAGGGAGC
AAACGATCTTCGAGTTCTAAGGAAAGCCAATCTACTAAACAGAAGGCCAAAATTCTCCAT
CCCCCTATTGAAACATTTTGGCAGTTACCTCCAACAAAAGAGCACAAGAAGTCTACCGGA
TCAAGAACCTTAAAAACCATAATGTCGTTGTCGTTAAAGAAGGGAGTTCAAAAGAGCAGA
AGTCTACGAACAATTCTTGAAGGATCACATGAGCCTAAAGATGAACAAATTGTTGACTCG
TTTCGTCAGTTGCTTTTTCTTGAGGGTCAGCTTCCAGGAAAACATAGTGACTATCATACA
CTTTTAAGATTTCTTAGAATGAGGGACTACGATCTTACAAAAGCAAAGAATATGTATTTG
AACTATCTGAAGTGGCGAGAGGAGTTTCATGTCGATGCACTTTCTGAGGAACTCAAGTTT
GAGGAATTTAATGAGGTTAAAAAGTGTTATCCTCATGGATTTCATGGAGTCGATAGATAT
GGTCGACCAATTTACATTGAAAGAATTGGAATGGTAAATCTCAATAGGCTCCTTGAAGTA
ACTAGTATTGAGAGATTTGTGAAATATCATGTGACTGAACAAGAGAAAACATTGAACTGG
AGATACTCTGCTTGCTCACTTGCTGCAAAGAAGCATATCGCTTCCACCGTCAGCATCTTG
GATGTGAAGGATGTGGGAATTTCGAATTTTTCAAAGCCAGCAAGGTATCTCTTTCTGGAA
ATTCAGAAGATTGACAGTCACTATTATCCAGAGACATTACATCGCCTTTTTATCATTAAT
GCTGGATCTGGATTTAAGGTCCTGTGGAAAGCAATCAAGACATTTCTTGATCAACGCACC
CTAGCAAAGATTCAAGTTCTTGGTAGCAACTACACGAAAACCTTACTTGAAGTTATTGAT
CCAAGTAACCTTCCAACTTTCTTTGGTGGCGACTGCACATGTTCTGACTATGGAGGTTGC
CTCTTTAGCGATAAAGGACCCTGGAATGACCCTGCCGTTACAACACTACTTCAGGCAATG
GTTGAAGCTGAAGAGGAGAATGGCGACGAAGAAAAGAATTCTGCTGCAAAAGATGCCTTT
GGTGGTGTTACTCATCATAATGTACATATTAAGGATGTCTTTGATGTGACTCCATCAAGA
AATGATACATTTGAGATAGCAAGACTTACTAATCAGCCATTTCTACAGAAGATCCTAACA
CTTCAAAGTGTTGTAAATGACACAAAAACAGTTTATGGTACAGAAAATCCAGGCATTGGA
AGCTGCTCTTAA

Peptide Sequence

PEP ID

XP_016454301.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH11-like isoform X3 [Nicotiana tabacum]
Sequence

MQTSKETFKEILISAGIRGSKRSSSSKESQSTKQKAKILHPPIETFWQLPPTKEHKKSTG
SRTLKTIMSLSLKKGVQKSRSLRTILEGSHEPKDEQIVDSFRQLLFLEGQLPGKHSDYHT
LLRFLRMRDYDLTKAKNMYLNYLKWREEFHVDALSEELKFEEFNEVKKCYPHGFHGVDRY
GRPIYIERIGMVNLNRLLEVTSIERFVKYHVTEQEKTLNWRYSACSLAAKKHIASTVSIL
DVKDVGISNFSKPARYLFLEIQKIDSHYYPETLHRLFIINAGSGFKVLWKAIKTFLDQRT
LAKIQVLGSNYTKTLLEVIDPSNLPTFFGGDCTCSDYGGCLFSDKGPWNDPAVTTLLQAM
VEAEEENGDEEKNSAAKDAFGGVTHHNVHIKDVFDVTPSRNDTFEIARLTNQPFLQKILT
LQSVVNDTKTVYGTENPGIGSCS

Transcript Sequence

Gene sequence data has not been registered.